The following are the data sources currently available from taxize
or pytaxize
. Get in touch with Scott (Github R, Github Python, email, twitter) if you want another added. Ideally the new one you have in mind has a REST API so we can quickly incorporate it.
Souce | Function prefix | API Docs | API key |
---|---|---|---|
Encylopedia of Life | eol |
link | link |
Taxonomic Name Resolution Service | tnrs |
link | none |
Integrated Taxonomic Information Service | itis |
link | none |
Phylomatic | phylomatic |
link | none |
uBio | ubio |
link | link |
Global Names Resolver | gnr |
link | none |
Global Names Index | gni |
link | none |
IUCN Red List | iucn |
link | none |
Tropicos | tp |
link | link |
Plantminer | plantminer |
link | link |
Theplantlist dot org | tpl |
** | none |
Catalogue of Life | col |
link | none |
Global Invasive Species Database | gisd |
*** | none |
National Center for Biotechnology Information | ncbi |
none | none |
CANADENSYS Vascan name search API | vascan |
link | none |